Estimation of introduction and transmission rates of SARS-CoV-2 in a prospective household study

van Boven, Michiel and van Dorp, Christiaan H. and Westerhof, Ilse and Jaddoe, Vincent and Heuvelman, Valerie and Duijts, Liesbeth and Fourie, Elandri and Sluiter-Post, Judith and van Houten, Marlies A. and Badoux, Paul and Euser, Sjoerd and Herpers, Bjorn and Eggink, Dirk and de Hoog, Marieke and Boom, Trisja and Wildenbeest, Joanne and Bont, Louis and Rozhnova, Ganna and Bonten, Marc J. and Kretzschmar, Mirjam E. and Bruijning-Verhagen, Patricia and Britton, Tom (2024) Estimation of introduction and transmission rates of SARS-CoV-2 in a prospective household study. PLOS Computational Biology, 20 (1). e1011832. ISSN 1553-7358

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Abstract

Household studies provide an efficient means to study transmission of infectious diseases, enabling estimation of susceptibility and infectivity by person-type. A main inclusion criterion in such studies is usually the presence of an infected person. This precludes estimation of the hazards of pathogen introduction into the household. Here we estimate age- and time-dependent household introduction hazards together with within household transmission rates using data from a prospective household-based study in the Netherlands. A total of 307 households containing 1,209 persons were included from August 2020 until March 2021. Follow-up of households took place between August 2020 and August 2021 with maximal follow-up per household mostly limited to 161 days. Almost 1 out of 5 households (59/307) had evidence of an introduction of SARS-CoV-2. We estimate introduction hazards and within-household transmission rates in our study population with penalized splines and stochastic epidemic models, respectively. The estimated hazard of introduction of SARS-CoV-2 in the households was lower for children (0-12 years) than for adults (relative hazard: 0.62; 95%CrI: 0.34-1.0). Estimated introduction hazards peaked in mid October 2020, mid December 2020, and mid April 2021, preceding peaks in hospital admissions by 1-2 weeks. Best fitting transmission models included increased infectivity of children relative to adults and adolescents, such that the estimated child-to-child transmission probability (0.62; 95%CrI: 0.40-0.81) was considerably higher than the adult-to-adult transmission probability (0.12; 95%CrI: 0.057-0.19). Scenario analyses indicate that vaccination of adults can strongly reduce household infection attack rates and that adding adolescent vaccination offers limited added benefit.

Item Type: Article
Subjects: Archive Paper Guardians > Biological Science
Depositing User: Unnamed user with email support@archive.paperguardians.com
Date Deposited: 23 Mar 2024 11:10
Last Modified: 23 Mar 2024 11:10
URI: http://archives.articleproms.com/id/eprint/2706

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